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Rebecca Johnson AM
Associate Director for ScienceDr. Rebecca Johnson is the Associate Director for Science and Chief Scientist at the National Museum of Natural History. She is responsible for overall leadership and administration of the museum’s research and collections activities. She oversees seven scientific departments comprising over 300 staff; the Laboratory of Analytical Biology; the Collections Program (care, registration, digitization); Academic Services to interns, graduate students, fellows, research associates and collaborators, and emeritus scientists; high-level liaison and hosting of resident Federal Agencies (USDA, Commerce, Interior, Defense); numerous cross-cutting strategic science initiatives; and field stations (Smithsonian Marine Station at Fort Pierce and Carrie Bow Cay, Belize).
Rebecca is a wildlife forensic scientist and conservation geneticist who most recently served as the Director of the Australian Museum Research Institute and Chief Scientist of the Australian Museum. As chief investigator of the Koala Genome Consortium she has significantly advanced scientific knowledge and contributed to management recommendations for this iconic Australian species.
Rebecca has an honors degree from the University of Sydney and PhD from La Trobe University Melbourne in the field of molecular evolutionary genetics and has worked as a molecular geneticist in Australia and the United States. Rebecca also holds the titles of adjunct Professor at the University of Sydney, conjoint Professor at the University of NSW and spent four months at Kyoto University in 2019 as a visiting Professor.
Journal Article
- Stuart, Katarina C., Johnson, Rebecca N., Major, Richard, Atsawawaranunt, Kamolphat, Ewart, Kyle M., Rollins, Lee A., Santure, Anna W., and Whibley, Annabel. 2024. "The genome of a globally invasive passerine, the common myna, Acridotheres tristis." DNA Research, https://doi.org/10.1093/dnares/dsae005.
- Atsawawaranunt, Kamolphat, Ewart, Kyle M., Major, Richard E., Johnson, Rebecca N., Santure, Anna W., and Whibley, Annabel. 2023. "Tracing the introduction of the invasive common myna using population genomics." Heredity, https://doi.org/10.1038/s41437-023-00621-w.
- Blaxter, Mark, Archibald, John M., Childers, Anna K., Coddington, Jonathan A., Crandall, Keith A., Di Palma, Federica, Durbin, Richard, Edwards, Scott V., Graves, Jennifer A. M., Hackett, Kevin J., Hall, Neil, Jarvis, Erich D., Johnson, Rebecca N., Karlsson, Elinor K., Kress, W. John, Kuraku, Shigehiro, Lawniczak, Mara K. N., Lindblad-Toh, Kerstin, Lopez, Jose V., Moran, Nancy A., Robinson, Gene E., Ryder, Oliver A., Shapiro, Beth, Soltis, Pamela S., Warnow, Tandy et al. 2022. "Why sequence all eukaryotes?" Proceedings of the National Academy of Sciences of the United States of America, 119, (4). https://doi.org/10.1073/pnas.2115636118.
- Damas, Joana, Corbo, Marco, Kim, Jaebum, Turner-Maier, Jason, Farré, Marta, Larkin, Denis M., Ryder, Oliver A., Steiner, Cynthia, Houck, Marlys L., Hall, Shaune, Shiue, Lily, Thomas, Stephen, Swale, Thomas, Daly, Mark, Korlach, Jonas, Uliano-Silva, Marcela, Mazzoni, Camila J., Birren, Bruce W., Genereux, Diane P., Johnson, Jeremy, Lindblad-Toh, Kerstin, Karlsson, Elinor K., Nweeia, Martin T., Johnson, Rebecca N., Consortium, Zoonomia et al. 2022. "Evolution of the ancestral mammalian karyotype and syntenic regions." Proceedings of the National Academy of Sciences of the United States of America, 119, (40). https://doi.org/10.1073/pnas.2209139119.
- Lawniczak, Mara K. N., Durbin, Richard, Flicek, Paul, Lindblad-Toh, Kerstin, Wei, Xiaofeng, Archibald, John M., Baker, William J., Belov, Katherine, Blaxter, Mark L., Bonet, Tomas Marques, Childers, Anna K., Coddington, Jonathan A., Crandall, Keith A., Crawford, Andrew J., Davey, Robert P., Di Palma, Federica, Fang, Qi, Haerty, Wilfried, Hall, Neil, Hoff, Katharina J., Howe, Kerstin, Jarvis, Erich D., Johnson, Warren E., Johnson, Rebecca N., Kersey, Paul J. et al. 2022. "Standards recommendations for the Earth BioGenome Project." Proceedings of the National Academy of Sciences of the United States of America, 119, (4). https://doi.org/10.1073/pnas.2115639118.
- Lott, Matthew J., Wright, Belinda R., Neaves, Linda E., Frankham, Greta J., Dennison, Siobhan, Eldridge, Mark D. B., Potter, Sally, Alquezar-Planas, David E., Hogg, Carolyn J., Belov, Katherine, and Johnson, Rebecca N. 2022. "Future-proofing the koala: Synergising genomic and environmental data for effective species management." Molecular ecology, 31, (11) 3035–3055. https://doi.org/10.1111/mec.16446.
- Paez, Sadye, Kraus, Robert H. S., Shapiro, Beth, Gilbert, M. T., Jarvis, Erich D., Vertebrate Genomes Project, Conservation Group, Al-Ajli, Farooq, Ceballos, Gerardo, Crawford, Andrew J., Fedrigo, Olivier, Johnson, Rebecca N., Johnson, Warren E., Marques-Bonet, Tomas, Morin, Phillip A., Mueller, Ralf C., Ryder, Oliver A., Teeling, Emma C., and Venkatesh, Byrappa. 2022. "Reference genomes for conservation." Science, 377, (6604) 364–366. https://doi.org/10.1126/science.abm8127.
- Hogg, Carolyn J., Morrison, Caitlin, Dudley, Jessica S., Alquezar-Planas, David E., Beasley-Hall, Perry G., Magrath, Michael J. L., Ho, Simon Y. W., Lo, Nathan, Johnson, Rebecca N., and Grueber, Catherine E. 2021. "Using phylogenetics to explore interspecies genetic rescue options for a critically endangered parrot." Conservation Science and Practice, https://doi.org/10.1111/csp2.483.
- Singh, Devika, Sun, Dan, King, Andrew G., Johnson, Rebecca N., Alvarez-Ponce, David, Yi, Soojin, V., and Alquezar-Planas, David E. 2021. "Koala methylomes reveal divergent and conserved DNA methylation signatures of X chromosome regulation." Proceedings of the Royal Society B: Biological Sciences, 288, (1945). https://doi.org/10.1098/rspb.2020.2244.
- Ewart, Kyle M., Lo, Nathan, Ogden, Rob, Joseph, Leo, Ho, Simon Y. W., Frankham, Greta J., Eldridge, Mark D. B., Schodde, Richard, and Johnson, Rebecca N. 2020. "Phylogeography of the iconic Australian red-tailed black-cockatoo ( Calyptorhynchus banksii ) and implications for its conservation." Heredity, 1–16. https://doi.org/10.1038/s41437-020-0315-y.
- Johnson, Rebecca N. 2020. "Tuatara genome reveals diverse insights into a remarkable reptile." Nature, 584 351–352. https://doi.org/10.1038/d41586-020-02063-4.
- Lavery, Tyrone H., Alabai, Masaafi, Esau, Tommy, Fuiberi, Simon, Furina, Di'ifaka, Johnson, Rebecca N., Kekeubata, Esau, MacLaren, David, Waneagea, Jackson, and Flannery, Tim F. 2020. "Integrating traditional knowledge, science and conservation in the search for undescribed mammals on Malaita, Solomon Islands." Pacific Conservation Biology, https://doi.org/10.1071/PC19037.
- Lott, Matthew J., Wright, Belinda R., Kemp, Leah F., Johnson, Rebecca N., and Hogg, Carolyn J. 2020. "Genetic Management of Captive and Reintroduced Bilby Populations." The Journal of Wildlife Management, 84, (1) 20–32. https://doi.org/10.1002/jwmg.21777.
- Morrison, Caitlin E., Hogg, Carolyn J., Gales, Rosemary, Johnson, Rebecca N., and Grueber, Catherine E. 2020. "Low innate immune-gene diversity in the critically endangered orange-bellied parrot (Neophema chrysogaster)." Emu - Austral Ornithology, 120, (1) 56–64. https://doi.org/10.1080/01584197.2019.1686994.
- Ueland, Maiken, Brown, Amber, Bartos, Cecilia, Frankham, Greta J., Johnson, Rebecca N., and Forbes, Shari L. 2020. "Profiling Volatilomes: A Novel Forensic Method for Identification of Confiscated Illegal Wildlife Items." Separations, 7, (1) 5. https://doi.org/10.3390/separations7010005.
- Ewart, Kyle M., Griffin, Andrea S., Johnson, Rebecca N., Kark, Salit, Cohen, Tali Magory, Lo, Nathan, and Major, Richard E. 2019. "Two speed invasion: assisted and intrinsic dispersal of common mynas over 150 years of colonization." Journal of Biogeography, 46, (1) 45–57. https://doi.org/10.1111/jbi.13473.
- Ewart, Kyle M., Johnson, Rebecca N., Ogden, Rob, Joseph, Leo, Frankham, Greta J., and Lo, Nathan. 2019. "Museum specimens provide reliable SNP data for population genomic analysis of a widely distributed but threatened cockatoo species." Molecular Ecology Resources, 19, (6) 1578–1592. https://doi.org/10.1111/1755-0998.13082.
- Jackson, Stephen M., Fleming, Peter Js, Eldridge, Mark Db, Ingleby, Sandy, Flannery, Tim, Johnson, Rebecca N., Cooper, Steven Jb, Mitchell, Kieren J., Souilmi, Yassine, Cooper, Alan, Wilson, Don E., and Helgen, Kristofer M. 2019. "The Dogma of Dingoes-Taxonomic status of the dingo: A reply to Smith et al." Zootaxa, 4564, (1) 198–212. https://doi.org/10.11646/zootaxa.4564.1.7.
- Lo, Nathan, Montagu, Ashley, Noack, Ann, Nahrung, Helen, Wei, Heng, Eldridge, Mark, Gray, Karen-Ann, Rose, Harley A., Cassis, Gerasimos, Johnson, Rebecca N., and Lawson, Simon. 2019. "Population genetics of the Australian eucalypt pest Thaumastocoris peregrinus: evidence for a recent invasion of Sydney." Journal of Pest Science, 92, (1) 201–212. https://doi.org/10.1007/s10340-018-0995-8.
- Mitchell, Andrew, Rothbart, Anna, Frankham, Greta, Johnson, Rebecca N., and Neaves, Linda E. 2019. "Could do better! A high school market survey of fish labelling in Sydney, Australia, using DNA barcodes." PeerJ, 7. https://doi.org/10.7717/peerj.7138.
- Summerell, A. E., Frankham, G. J., Gunn, P., and Johnson, Rebecca N. 2019. "DNA based method for determining source country of the short beaked echidna (Tachyglossus aculeatus) in the illegal wildlife trade." Forensic science international, 295 46–53. https://doi.org/10.1016/j.forsciint.2018.11.019.
- Ward, Jodie, Johnson, Rebecca N., and Wilson-Wilde, Linzi. 2019. "Gender equity: how do the forensic sciences fare?" Australian Journal of Forensic Sciences, 51 S263–S267. https://doi.org/10.1080/00450618.2019.1568556.
- Wright, B. R., Grueber, C. E., Lott, M. J., Belov, K., Johnson, Rebecca N., and Hogg, C. J. 2019. "Impact of reduced-representation sequencing protocols on detecting population structure in a threatened marsupial." Molecular biology reports, 46, (5) 5575–5580. https://doi.org/10.1007/s11033-019-04966-6.
- Duchêne, David A., Bragg, Jason G., Duchêne, Sebastián, Neaves, Linda E., Potter, Sally, Moritz, Craig, Johnson, Rebecca N., Ho, Simon Y. W., and Eldridge, Mark D. B. 2018. "Analysis of Phylogenomic Tree Space Resolves Relationships Among Marsupial Families." Systematic Biology, 67, (3) 400–412. https://doi.org/10.1093/sysbio/syx076.
- Eldridge, Mark D. B., Potter, Sally, Helgen, Kristofer M., Sinaga, Martua H., Aplin, Ken P., Flannery, Tim F., and Johnson, Rebecca N. 2018. "Phylogenetic analysis of the tree-kangaroos (Dendrolagus) reveals multiple divergent lineages within New Guinea." Molecular phylogenetics and evolution, 127 589–599. https://doi.org/10.1016/j.ympev.2018.05.030.
- Ewart, Kyle M., Frankham, Greta J., McEwing, Ross, The, Dang Tat, Hogg, Carolyn J., Wade, Claire, Lo, Nathan, and Johnson, Rebecca N. 2018. "A rapid multiplex PCR assay for presumptive species identification of rhinoceros horns and its implementation in Vietnam." PLOS ONE, 13, (6). https://doi.org/10.1371/journal.pone.0198565.
- Ewart, Kyle M., Frankham, Greta J., McEwing, Ross, Webster, Lucy M. I., Ciavaglia, Sherryn A., Linacre, Adrian M. T., The, Dang Tat, Ovouthan, Kanitia, and Johnson, Rebecca N. 2018. "An internationally standardized species identification test for use on suspected seized rhinoceros horn in the illegal wildlife trade." Forensic Science International: Genetics, 32 33–39. https://doi.org/10.1016/j.fsigen.2017.10.003.
- Hogg, Carolyn J., Dennison, Siobhan, Frankham, Greta J., Hinds, Meagan, and Johnson, Rebecca N. 2018. "Stopping the spin cycle: genetics and bio-banking as a tool for addressing the laundering of illegally caught wildlife as 'captive-bred'." Conservation Genetics Resources, 10, (2) 237–246. https://doi.org/10.1007/s12686-017-0784-3.
- Johnson, Rebecca N., O'Meally, Denis, Chen, Zhiliang, Etherington, Graham J., Ho, Simon Y. W., Nash, Will J., Grueber, Catherine E., Cheng, Yuanyuan, Whittington, Camilla M., Dennison, Siobhan, Peel, Emma, Haerty, Wilfried, O'Neill, Rachel J., Colgan, Don, Russell, Tonia L., Alquezar-Planas, David, Attenbrow, Val, Bragg, Jason G., Brandies, Parice A., Chong, Amanda Yoon-Yee, Deakin, Janine E., Di Palma, Federica, Duda, Zachary, Eldridge, Mark D. B., Ewart, Kyle M. et al. 2018. "Adaptation and conservation insights from the koala genome." Nature genetics, 50, (8) 1102–1111. https://doi.org/10.1038/s41588-018-0153-5.
- Löber, Ulrike, Hobbs, Matthew, Dayaram, Anisha, Tsangaras, Kyriakos, Jones, Kiersten, Alquezar-Planas, David, Ishida, Yasuko, Meers, Joanne, Mayer, Jens, Quedenau, Claudia, Chen, Wei, Johnson, Rebecca N., Timms, Peter, Young, Paul R., Roca, Alfred L., and Greenwood, Alex D. 2018. "Degradation and remobilization of endogenous retroviruses by recombination during the earliest stages of a germ-line invasion." Proceedings of the National Academy of Sciences of the United States of America, 115, (34) 8609–8614. https://doi.org/10.1073/pnas.1807598115.
- Neaves, Linda E., Danks, Melissa, Lott, Matthew J., Dennison, Siobhan, Frankham, Greta J., King, Andrew, Eldridge, Mark D. B., Johnson, Rebecca N., and Divljan, Anja. 2018. "Unmasking the complexity of species identification in Australasian flying-foxes." PLOS ONE, 13, (4). https://doi.org/10.1371/journal.pone.0194908.
- Ahlers, N., Creecy, J., Frankham, G., Johnson, Rebecca N., Kotze, A., Linacre, A., McEwing, R., Mwale, M., Rovie-Ryan, J., Sitam, F., and Webster, L. M. I. 2017. "'ForCyt' DNA database of wildlife species." Forensic Science International: Genetics Supplement Series, 6 e466–e468. https://doi.org/10.1016/j.fsigss.2017.09.195.
- Dennison, S., Frankham, G. J., Neaves, L. E., Flanagan, C., FitzGibbon, S., Eldridge, M. D. B., and Johnson, Rebecca N. 2017. "Population genetics of the koala (Phascolarctos cinereus) in north-eastern New South Wales and south-eastern Queensland." Australian Journal of Zoology, 64, (6) 402–412. https://doi.org/10.1071/ZO16081.
- Eldridge, Mark D. B., Divljan, Anja, Ingleby, Sandy, Johnson, Rebecca N., King, Andrew G., Major, Richard E., Parnaby, Harry E., and Tsang, Leah. 2017. "The Australian Museum Lord Howe Island Expedition 2017-birds and mammals." Technical Reports of the Australian Museum (online), 26 25–43. https://doi.org/10.3853/j.1835-4211.26.2017.1704.
- Hobbs, Matthew, King, Andrew, Salinas, Ryan, Chen, Zhiliang, Tsangaras, Kyriakos, Greenwood, Alex D., Johnson, Rebecca N., Belov, Katherine, Wilkins, Marc R., and Timms, Peter. 2017. "Long-read genome sequence assembly provides insight into ongoing retroviral invasion of the koala germline." Scientific Reports, 7, (1). https://doi.org/10.1038/s41598-017-16171-1.
- Cui, Pin, Löber, Ulrike, Alquezar-Planas, David, Ishida, Yasuko, Courtiol, Alexandre, Timms, Peter, Johnson, Rebecca N., Lenz, Dorina, Helgen, Kristofer M., Roca, Alfred L., Hartman, Stefanie, and Greenwood, Alex D. 2016. "Comprehensive profiling of retroviral integration sites using target enrichment methods from historical koala samples without an assembled reference genome." PeerJ, 4 e1847. https://doi.org/10.7717/peerj.1847.
- Neaves, Linda E., Frankham, Greta J., Dennison, Siobhan, FitzGibbon, Sean, Flannagan, Cheyne, Gillett, Amber, Hynes, Emily, Handasyde, Kathrine, Helgen, Kristofer M., Tsangaras, Kyriakos, Greenwood, Alex D., Eldridge, Mark D. B., and Johnson, Rebecca N. 2016. "Phylogeography of the Koala, (Phascolarctos cinereus), and Harmonising Data to Inform Conservation." PLOS ONE, 11, (9) 1–22. https://doi.org/10.1371/journal.pone.0162207.
- Ueland, Maiken, Ewart, Kyle, Troobnikoff, Amanda N., Frankham, Greta, Johnson, Rebecca N., and Forbes, Shari L. 2016. "A rapid chemical odour profiling method for the identification of rhinoceros horns." Forensic science international, 266 e99–e102. https://doi.org/10.1016/j.forsciint.2016.05.011.